STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0589Protein of unknown function DUF330; InterPro IPR005586; KEGG: dol:Dole_1014 ABC-type transport system auxiliary component-like protein; PFAM: protein of unknown function DUF330; SPTR: A8ZWW8 ABC-type transport system auxiliary component-like protein; PFAM: Protein of unknown function (DUF330). (211 aa)    
Predicted Functional Partners:
Deba_0590
Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: dol:Dole_1015 hypothetical protein; PFAM: Mammalian cell entry related domain protein; SPTR: A8ZWW9 Mammalian cell entry related domain protein; PFAM: mce related protein.
 
   0.932
Deba_0591
ABC transporter related protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: pca:Pcar_2750 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9ZQV3 ABC transporter related protein; PFAM: ABC transporter.
 
    0.834
Deba_0592
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR002645:IPR003453; KEGG: dba:Dbac_0468 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C7LVW4 Putative uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
  
 0.778
Deba_0588
TPR repeat-containing protein; InterPro IPR001440:IPR019734:IPR011990:IPR013026; KEGG: rca:Rcas_0215 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: A7NFW7 Tetratricopeptide TPR_2 repeat protein.
 
     0.659
Deba_0593
Hypothetical protein; KEGG: asa:ASA_4345 sensory histidine kinase CreC; SPTR: Q0UKW3 Putative uncharacterized protein.
       0.567
Deba_0910
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR001444:IPR010930:IPR006299; KEGG: mgm:Mmc1_0267 flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: C7ILJ6 Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.560
Deba_2311
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.560
Deba_2382
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.544
Deba_0594
Metallophosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: sml:Smlt2170 putative calcineurin phosphoesterase; PFAM: metallophosphoesterase; SPTR: B2FPM6 Putative calcineurin phosphoesterase; PFAM: Calcineurin-like phosphoesterase.
 
     0.543
Deba_2749
Protein of unknown function DUF2143; InterPro IPR019222; KEGG: drt:Dret_1951 MJ0042 family finger-like protein; PFAM: Protein of unknown function DUF2143; SPTR: C0GMP0 MJ0042 family finger-like protein; PFAM: Yip1 domain.
  
     0.527
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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