STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0611COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_2921 putative mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Q1D891 Putative mannosyltransferase; PFAM: Glycosyl transferases group 1. (383 aa)    
Predicted Functional Partners:
Deba_0612
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_2920 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Q1D892 Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
 
     0.947
Deba_0613
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rrs:RoseRS_3332 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: A5UYJ0 Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
 
     0.940
Deba_0616
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gbm:Gbem_3449 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: B5EBF0 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
 
     0.815
Deba_0455
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR016040:IPR017473:IPR017475; KEGG: mxa:MXAN_2922 sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1PWC3 Similar to capsular polysaccharide synthesis protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; e [...]
 
  
 0.804
Deba_0614
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: glo:Glov_2754 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B3E7F0 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
    0.790
Deba_0615
Membrane-bound metal-dependent hydrolase; InterPro IPR007404; KEGG: hch:HCH_06173 hypothetical protein; PFAM: membrane-bound metal-dependent hydrolase; SPTR: A0YXX1 Putative uncharacterized protein; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).
       0.773
Deba_0451
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0904 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: D1C274 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.727
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.675
Deba_3090
Sugar transferase, PEP-CTERM system associated; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR017464:IPR003362; KEGG: dat:HRM2_19690 CpsE; PFAM: sugar transferase; SPTR: C0QCJ3 CpsE; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.589
Deba_3101
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: scl:sce0549 glycogen synthase; PFAM: glycosyl transferase group 1; SPTR: A9GV48 Glycogen synthase; PFAM: Glycosyl transferases group 1.
      0.559
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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