Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_0618KEGG: glo:Glov_0605 hypothetical protein; SPTR: B3E3C0 Putative uncharacterized protein; PFAM: Prolipoprotein diacylglyceryl transferase. (348 aa)    
Predicted Functional Partners:
Deba_0619
COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR003817; KEGG: gur:Gura_1505 phosphatidylserine decarboxylase-related; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: A5GE49 Phosphatidylserine decarboxylase-related; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; Belongs to the phosphatidylserine decarboxylase family.
 
    0.963
Deba_0620
KEGG: ppd:Ppro_2684 hypothetical protein; SPTR: A1ASG7 Putative uncharacterized protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
 
     0.957
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
    0.754
trpB-2
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
    0.721
Deba_0316
KEGG: dol:Dole_2397 hypothetical protein; SPTR: A8ZVL4 Putative uncharacterized protein.
  
     0.675
Deba_0317
Response regulator receiver protein; COGs: COG1102 Cytidylate kinase; KEGG: dol:Dole_2398 response regulator receiver protein; SPTR: A8ZVL5 Response regulator receiver protein.
  
     0.672
Deba_3119
NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterProIPR016040:IPR002123:IPR011128:IPR006168:IPR 004827:IPR000463; KEGG: dat:HRM2_10650 GpsA1; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: C0QL91 GpsA1; PFAM: Acyltransferase; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus.
 
  
 0.654
Deba_1389
Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dal:Dalk_0799 beta-lactamase domain protein; SPTR: B8FHT7 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily.
 
   
 0.621
yidC
Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
  
 0.592
Deba_3113
KEGG: sat:SYN_00080 putative cytoplasmic protein; SPTR: Q2LWI3 Hypothetical cytosolic protein.
  
     0.579
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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