STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0629Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299:IPR020726; KEGG: pdi:BDI_1486 alginate O-acetylation protein, putative alginate O-acetyltransferase; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: B4D6B3 Membrane bound O-acyl transferase MBOAT family protein; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family. (473 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.933
Deba_0628
Hypothetical protein; InterPro IPR013830:IPR003006; KEGG: lhk:LHK_02194 probable oxidoreductase; SPTR: B4D6B2 Putative uncharacterized protein.
       0.773
Deba_2074
Hypothetical protein; KEGG: rpd:RPD_0465 alginate O-acetyltransferase AlgJ; SPTR: Q13DY6 Putative AlgJ protein, required for O-acetylation of alginate in Pseudomonas aeruginosa.
 
     0.747
Deba_0627
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR017896:IPR012285:IPR009051:IPR004017:IPR 017900:IPR017969; KEGG: sfu:Sfum_2146 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A0LK76 Putative uncharacterized protein; PFAM: Cysteine-rich domain.
       0.421
Deba_0352
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
   
  
 0.416
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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