STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0654KEGG: dma:DMR_30720 hypothetical protein; SPTR: C4XII7 Putative uncharacterized protein. (581 aa)    
Predicted Functional Partners:
Deba_0653
Protein of unknown function DUF401; COGs: COG1906 conserved hypothetical protein; InterPro IPR007294; KEGG: dol:Dole_1082 hypothetical protein; PFAM: protein of unknown function DUF401; SPTR: A8ZX33 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF401); TIGRFAM: converved hypothetical integral membrane protein.
       0.773
Deba_2349
COGs: COG4641 conserved hypothetical protein; KEGG: gsu:GSU3024 hypothetical protein; SPTR: Q748H8 Putative uncharacterized protein.
 
  
 0.723
Deba_2343
KEGG: dma:DMR_23530 hypothetical protein; SPTR: C4XT02 Putative uncharacterized protein.
  
  
 0.676
Deba_0651
KEGG: mxa:MXAN_4632 putative lipoprotein; SPTR: Q1D3H5 Putative lipoprotein.
       0.518
Deba_0652
COGs: COG0015 Adenylosuccinate lyase; InterProIPR004769:IPR008948:IPR000362:IPR003031:IPR 019468:IPR020557; KEGG: dal:Dalk_1188 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: B8F9E5 Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.518
Deba_1139
KEGG: dsa:Desal_2444 hypothetical protein; SPTR: C6BXX0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2867).
  
     0.513
Deba_0655
InterPro IPR013247; KEGG: dal:Dalk_4331 SH3 type 3 domain protein; PFAM: SH3 type 3 domain protein; SPTR: B8FMH3 SH3 type 3 domain protein; PFAM: Bacterial SH3 domain.
       0.491
Deba_2344
Protein of unknown function DUF115; COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: mta:Moth_0762 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: Q2RKF9 Putative uncharacterized protein; PFAM: Protein of unknown function DUF115.
  
     0.432
Deba_2081
O-antigen polymerase; InterPro IPR018271:IPR007016; KEGG: tye:THEYE_A0427 O-antigen polymerase family; PFAM: O-antigen polymerase; SPTR: B5YJ59 O-Antigen Polymerase family; PFAM: O-Antigen ligase.
  
  
 0.400
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.