STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0683KEGG: bav:BAV2122 hypothetical protein; SPTR: B5GK01 Two-component system response regulator. (188 aa)    
Predicted Functional Partners:
Deba_0684
COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043; KEGG: mem:Memar_0808 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: A3CTP1 Xanthine/uracil/vitamin C permease; PFAM: Permease family.
       0.608
Deba_0682
CoA-binding domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterProIPR011761:IPR016040:IPR016102:IPR013650:IPR 003781; KEGG: dat:HRM2_02900 hypothetical protein; PFAM: CoA-binding domain protein; ATP-grasp domain protein; SPTR: C0QFL6 Putative uncharacterized protein; PFAM: CoA binding domain.
       0.465
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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