STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Deba_0785NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017896:IPR012335:IPR012336:IPR011538:IPR 019554:IPR019575:IPR001450:IPR017900:IPR019825:IPR001949; KEGG: dal:Dalk_2271 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: B8FIH4 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoredu [...] (633 aa)    
Predicted Functional Partners:
Deba_0784
COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012335:IPR012336; KEGG: dal:Dalk_2272 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: B8FIH5 NADH dehydrogenase (Ubiquinone) 24 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit.
 0.999
Deba_1526
COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR012336:IPR002023:IPR012335; KEGG: dat:HRM2_16590 NuoE; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: C0QAI2 NuoE; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.
 0.998
Deba_2838
COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012335:IPR012336; KEGG: adg:Adeg_0158 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: C9RAQ3 NADH dehydrogenase (Ubiquinone) 24 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.
 0.998
Deba_0786
Ferredoxin; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR001041:IPR017896:IPR001450:IPR017900:IPR 000283; KEGG: dal:Dalk_2270 ferredoxin; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FIH3 Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
 
 0.997
Deba_2840
Ferredoxin; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR001450:IPR017896:IPR017900; KEGG: dal:Dalk_5090 ferredoxin; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FDY0 Ferredoxin.
 
 0.992
Deba_2120
NADH dehydrogenase (quinone); COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR017896:IPR017900:IPR006655:IPR 000283:IPR019574:IPR001450:IPR006963:IPR006656; KEGG: dat:HRM2_16870 FdhA5; PFAM: molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: C0QAZ5 FdhA5; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G [...]
 
 
 0.989
Deba_0481
Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR001450:IPR006963:IPR006656:IPR 009051:IPR017896:IPR017900:IPR006655; KEGG: dds:Ddes_1544 molybdopterin oxidoreductase Fe4s4 region; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8J119 Molybdopterin oxidoreductase Fe4S4 region; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain.
 
 
 0.983
Deba_1523
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR009016:IPR001450:IPR007202:IPR010766:IPR 017896:IPR017900; KEGG: dat:HRM2_16550 iron-sulfur binding hydrogenase; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; DRTGG domain protein; SPTR: C0QAH8 Iron-sulfur binding hydrogenase; PFAM: Iron only hydrogenase large subunit, C-terminal domain; DRTGG domain; Putative Fe-S cluster; 4Fe-4S binding domain.
 
 
 
 0.980
Deba_0482
Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR006656:IPR006657:IPR009010; KEGG: sfu:Sfum_0031 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: A0LE82 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.975
Deba_0488
Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR019574:IPR001450:IPR006963:IPR 006656:IPR017896:IPR017900; KEGG: sfu:Sfum_3509 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LP28 Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S bind [...]
  
 
 0.975
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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