Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_0795Transcriptional regulator, XRE family; COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: glo:Glov_0100 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; SPTR: B3E9H1 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix. (68 aa)    
Predicted Functional Partners:
Deba_0794
KEGG: dma:DMR_26440 hypothetical membrane protein; SPTR: C4XUB3 Hypothetical membrane protein; PFAM: Protein of unknown function (DUF2975).
 
   
 0.877
Deba_0796
Conserved hypothetical protein; InterPro IPR020080:IPR013838; KEGG: ppd:Ppro_2085 hypothetical protein; SPTR: A1AQS3 Putative uncharacterized protein.
       0.500
Deba_0793
Flavodoxin; InterPro IPR008254; KEGG: sat:SYN_01229 flavodoxin; SPTR: Q2LW80 Flavodoxin; PFAM: NADPH-dependent FMN reductase.
       0.431
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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