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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0851UspA domain protein; InterPro IPR014729:IPR006015:IPR006016; KEGG: dol:Dole_1866 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A8ZSD3 UspA domain protein; PFAM: Universal stress protein family. (311 aa)    
Predicted Functional Partners:
Deba_1999
Protein of unknown function DUF181; COGs: COG1944 conserved hypothetical protein; InterProIPR019734:IPR003776:IPR001440:IPR013105:IPR 013026:IPR011990; KEGG: dol:Dole_1241 hypothetical protein; PFAM: protein of unknown function DUF181; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SPTR: A8ZY40 Putative uncharacterized protein; PFAM: YcaO-like family; Tetratricopeptide repeat; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
 
 0.763
Deba_0852
KEGG: dvm:DvMF_2890 hypothetical protein; SPTR: B8DRJ0 Putative uncharacterized protein.
       0.746
Deba_3067
KEGG: sfu:Sfum_0040 hypothetical protein; SPTR: A0LE91 Putative uncharacterized protein.
  
     0.697
Deba_2047
Conserved hypothetical protein; InterPro IPR016024:IPR011989; KEGG: dal:Dalk_2376 hypothetical protein; SPTR: Q1NTE0 HEAT.
  
     0.670
Deba_2343
KEGG: dma:DMR_23530 hypothetical protein; SPTR: C4XT02 Putative uncharacterized protein.
  
     0.655
Deba_2892
Peptidase M48 Ste24p; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterProIPR001915:IPR001440:IPR019734:IPR011990:IPR 013026; KEGG: dps:DP0525 hypothetical protein; PFAM: peptidase M48 Ste24p; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: C8R0Y9 Peptidase M48 Ste24p; PFAM: Peptidase family M48.
  
     0.655
Deba_1373
KEGG: dps:DP0753 hypothetical protein; SPTR: C8QY26 Putative uncharacterized protein.
  
     0.654
Deba_0826
KEGG: dol:Dole_1197 hypothetical protein; SPTR: A8ZXP5 Putative uncharacterized protein.
  
     0.647
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
 0.636
Deba_1764
KEGG: dol:Dole_2107 hypothetical protein; SPTR: A8ZTX8 Putative uncharacterized protein.
  
     0.633
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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