Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Deba_0879Peptidoglycan-binding lysin domain protein; InterPro IPR018392; KEGG: tgr:Tgr7_2244 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: C0GS09 Putative uncharacterized protein; PFAM: LysM domain. (148 aa)    
Predicted Functional Partners:
Deba_1575
GPW/gp25 family protein; InterPro IPR007048; KEGG: drm:Dred_1219 gpW/GP25 family protein; PFAM: GPW/gp25 family protein; SPTR: C2BG15 GPW/gp25 family protein; PFAM: Gene 25-like lysozyme.
 
 
 0.943
Deba_1584
Conserved hypothetical protein; COGs: COG3497 Phage tail sheath protein FI; KEGG: drm:Dred_1212 hypothetical protein; SPTR: A4J3U3 Putative uncharacterized protein; PFAM: Phage tail sheath protein.
 
 
 0.919
Deba_1801
COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: sfu:Sfum_3815 phage tail sheath protein; PFAM: tail sheath protein; SPTR: C6MK56 Tail sheath protein; PFAM: Phage tail sheath protein.
  
 
 0.906
Deba_1573
Hypothetical protein; KEGG: mca:MCA2905 prophage MuMc02 tail fiber domain-containing protein; SPTR: Q603A2 Prophage MuMc02, tail fiber domain protein; PFAM: Phage tail protein (Tail_P2_I).
  
 
 0.844
Deba_1600
Hypothetical protein; InterPro IPR009057; KEGG: rce:RC1_1105 hypothetical protein; SPTR: C4WG48 Putative uncharacterized protein.
  
 
 0.844
Deba_1578
Late control D family protein; COGs: COG3500 Phage protein D; InterPro IPR010277; KEGG: drm:Dred_1216 phage late control D family protein; PFAM: late control D family protein; SPTR: B6WRQ9 Putative uncharacterized protein; PFAM: Phage late control gene D protein (GPD).
 
   0.824
Deba_1794
COGs: COG3500 Phage protein D; KEGG: dde:Dde_0938 phage protein D-like; SPTR: Q314A7 Phage protein D-like; PFAM: Phage late control gene D protein (GPD).
  
   0.791
Deba_0841
Transport-associated protein; COGs: COG1102 Cytidylate kinase; InterPro IPR007055; KEGG: gbm:Gbem_2312 transport-associated; PFAM: transport-associated; SPTR: C6MT75 Transport-associated protein; PFAM: Putative phospholipid-binding domain.
 
  
 0.753
Deba_1577
COGs: COG4540 Phage P2 baseplate assembly protein gpV; InterPro IPR013046:IPR006531; KEGG: drm:Dred_1217 phage baseplate assembly protein V; PFAM: baseplate assembly protein V; SPTR: B6WRR1 Putative uncharacterized protein; TIGRFAM: phage baseplate assembly protein V; PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V.
 
 
   0.687
Deba_2343
KEGG: dma:DMR_23530 hypothetical protein; SPTR: C4XT02 Putative uncharacterized protein.
  
     0.673
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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