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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0934Peptidoglycan binding domain protein; COGs: COG3926 Putative secretion activating protein; InterPro IPR008565:IPR018537; KEGG: pde:Pden_4087 hypothetical protein; PFAM: Peptidoglycan binding domain; protein of unknown function DUF847; SPTR: A1B9F9 Putative uncharacterized protein; PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847). (180 aa)    
Predicted Functional Partners:
Deba_1580
Phage tail tape measure protein, TP901 family; COGs: COG5283 Phage-related tail protein; InterPro IPR010090; KEGG: rce:RC1_1127 phage tail tape measure protein, TP901 family, core region; PFAM: tail tape measure protein TP901 core region; SPTR: C6NTT0 Phage tail length tape-measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
 
     0.517
Deba_0935
KEGG: chu:CHU_2908 ribonucleoprotein-like; SPTR: Q11R14 Putative uncharacterized protein.
       0.512
Deba_1587
COGs: COG5005 Mu-like prophage protein gpG; InterPro IPR006522; KEGG: dvu:DVU1114 virion morphogenesis protein; PFAM: virion morphogenesis (putative tail completion) protein; SPTR: Q72D17 Virion morphogenesis protein; TIGRFAM: phage virion morphogenesis protein; PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein.
 
     0.508
Deba_0932
KEGG: nfa:nfa15900 hypothetical protein; SPTR: Q5YZF5 Putative uncharacterized protein.
       0.478
Deba_0924
Putative phytochrome sensor protein; InterPro IPR003018; KEGG: sfu:Sfum_1918 hypothetical protein; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: A0LJK1 Putative uncharacterized protein; PFAM: GAF domain.
  
     0.474
Deba_1577
COGs: COG4540 Phage P2 baseplate assembly protein gpV; InterPro IPR013046:IPR006531; KEGG: drm:Dred_1217 phage baseplate assembly protein V; PFAM: baseplate assembly protein V; SPTR: B6WRR1 Putative uncharacterized protein; TIGRFAM: phage baseplate assembly protein V; PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V.
 
     0.467
Deba_1597
Phage head morphogenesis protein, SPP1 gp7 family; COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30; InterPro IPR006528; KEGG: dde:Dde_3374 phage putative head morphogenesis protein, SPP1 gp7; PFAM: putative head morphogenesis protein SPP1 gp7; SPTR: Q30VX8 Phage putative head morphogenesis protein, SPP1 gp7; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.461
Deba_3096
Hypothetical protein; KEGG: phe:Phep_2408 heparinase II/III family protein; SPTR: B0NLH9 Putative uncharacterized protein.
  
     0.457
Deba_1596
Protein of unknown function DUF935; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: dde:Dde_3373 hypothetical protein; PFAM: protein of unknown function DUF935; SPTR: Q30VX9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF935).
 
     0.447
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.445
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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