STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_0974Protein of unknown function DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR008928:IPR012336:IPR004879:IPR012335; KEGG: sfu:Sfum_2547 hypothetical protein; PFAM: protein of unknown function DUF255; SPTR: A0LLC3 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255. (681 aa)    
Predicted Functional Partners:
Deba_1915
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: bbe:BBR47_28890 hypothetical protein; PFAM: aldo/keto reductase; SPTR: C0ZDK7 Putative uncharacterized protein; PFAM: Aldo/keto reductase family.
 
      0.806
Deba_0975
KEGG: dps:DP0200 hypothetical protein; SPTR: Q6ARU6 Putative uncharacterized protein.
       0.493
Deba_0290
Lipolytic protein G-D-S-L family; InterPro IPR001087:IPR013830; KEGG: dal:Dalk_4253 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: B8FM96 Putative uncharacterized protein.
   
 
 0.481
Deba_3075
Hypothetical protein; InterPro IPR013830:IPR013831; KEGG: mgm:Mmc1_1079 GDSL family lipase; SPTR: A0L6K4 Lipolytic enzyme, G-D-S-L family.
   
 
 0.481
Deba_3235
Lipolytic protein G-D-S-L family; InterPro IPR013830:IPR001087; KEGG: dma:DMR_02790 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C4XGJ0 Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
   
 
 0.481
Deba_0976
KEGG: dvl:Dvul_1350 hypothetical protein; SPTR: Q72B28 Putative uncharacterized protein.
       0.421
purE
Phosphoribosylamine/glycine ligase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR); Belongs to the GARS family.
       0.418
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.