Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Deba_0975KEGG: dps:DP0200 hypothetical protein; SPTR: Q6ARU6 Putative uncharacterized protein. (158 aa)    
Predicted Functional Partners:
Deba_0976
KEGG: dvl:Dvul_1350 hypothetical protein; SPTR: Q72B28 Putative uncharacterized protein.
       0.672
Deba_1755
Rieske (2Fe-2S) iron-sulfur domain protein; COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941:IPR005805:IPR017909; KEGG: sth:STH3146 plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Q67JM2 Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.620
Deba_1576
KEGG: cvi:CV_0414 hypothetical protein; SPTR: Q7P101 Putative uncharacterized protein; PFAM: Phage P2 GpU.
  
     0.587
Deba_1754
Cytochrome b/b6 domain protein; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR016174:IPR005797:IPR016175; KEGG: sth:STH3148 menaquinol-cytochrome c reductase; PFAM: Cytochrome b/b6 domain; SPTR: Q67JM0 Menaquinol-cytochrome C reductase; PFAM: Cytochrome b(N-terminal)/b6/petB.
   
 
 0.540
Deba_0907
Tetratricopeptide TPR_2 repeat protein; InterProIPR019734:IPR013026:IPR011990:IPR001440:IPR 013105; KEGG: dvm:DvMF_1325 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: B8DLL2 TPR repeat-containing protein; TIGRFAM: outer membrane assembly lipoprotein YfiO.
  
     0.507
Deba_0974
Protein of unknown function DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR008928:IPR012336:IPR004879:IPR012335; KEGG: sfu:Sfum_2547 hypothetical protein; PFAM: protein of unknown function DUF255; SPTR: A0LLC3 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255.
       0.493
Deba_3244
InterPro IPR008969; KEGG: hypothetical protein; SPTR: B7G5I9 Predicted protein.
  
     0.492
Deba_2629
Rhodanese domain protein; InterPro IPR001763; KEGG: tgr:Tgr7_0713 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: B8GMH3 Rhodanese domain-containing protein; PFAM: Rhodanese-like domain.
  
    0.481
Deba_3096
Hypothetical protein; KEGG: phe:Phep_2408 heparinase II/III family protein; SPTR: B0NLH9 Putative uncharacterized protein.
  
     0.473
Deba_2233
Anti-sigma-factor antagonist; InterPro IPR002645; KEGG: hmo:HM1_0319 anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Q1NPE5 Sulfate transporter/antisigma-factor antagonist STAS; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.467
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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