STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1080KEGG: dol:Dole_0381 hypothetical protein; SPTR: A8ZT27 Putative uncharacterized protein. (139 aa)    
Predicted Functional Partners:
Deba_1081
RNA-binding protein, predicted; InterPro IPR019300; KEGG: tye:THEYE_A0086 hypothetical protein; PFAM: RNA-binding protein, predicted; SPTR: B5YHB6 Putative uncharacterized protein; PFAM: Predicted RNA-binding protein.
 
     0.951
Deba_1082
Conserved hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: dol:Dole_2131 hypothetical protein; SPTR: A8ZU02 Putative uncharacterized protein.
       0.678
plsY
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.553
Deba_1935
KEGG: gsu:GSU3079 hypothetical protein; SPTR: Q748C8 Putative uncharacterized protein.
  
     0.507
Deba_1483
KEGG: dal:Dalk_0095 hypothetical protein; SPTR: B8FKJ0 Putative uncharacterized protein.
  
     0.503
Deba_1101
LIM zinc-binding protein; InterPro IPR001781; KEGG: dat:HRM2_33650 hypothetical protein; PFAM: LIM zinc-binding protein; SPTR: B2DD80 Putative uncharacterized protein; PFAM: LIM domain.
  
     0.487
Deba_3151
KEGG: sfu:Sfum_1611 hypothetical protein; SPTR: A0LIP6 Conserved hypothetical membrane protein.
  
     0.480
Deba_1083
InterPro IPR000620; KEGG: gur:Gura_2208 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: A5G3M5 Putative uncharacterized protein; PFAM: EamA-like transporter family.
       0.443
Deba_2523
KEGG: mtp:Mthe_0882 hypothetical protein; SPTR: A0B7J6 Putative uncharacterized protein.
  
     0.440
Deba_2634
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR017900:IPR001450:IPR017896; KEGG: dol:Dole_2297 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8ZV11 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.425
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.