STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1175Alpha-2-macroglobulin domain protein; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR008930:IPR002890:IPR011625:IPR001599; KEGG: acp:A2cp1_1926 alpha-2-macroglobulin domain protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin; SPTR: B8J778 Alpha-2-macroglobulin domain protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain. (1853 aa)    
Predicted Functional Partners:
Deba_1176
Penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterProIPR012338:IPR001264:IPR001460:IPR009647:IPR 011815; KEGG: ade:Adeh_2036 glycosyl transferase family penicillin-binding protein transpeptidase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Q2IJH6 Glycosyl transferase, family 51 / Penicillin-binding protein, transpeptidase; TIGRFAM: penicillin-binding protein 1C; PFAM: Penicillin-Binding Protein C-terminus Fami [...]
 
   
 0.951
Deba_3107
Hypothetical protein; InterPro IPR006624; KEGG: scl:sce9098 hypothetical protein; SPTR: A9GA14 Putative uncharacterized protein.
  
 
 0.926
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
    0.716
Deba_1177
COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR001451; KEGG: sfu:Sfum_2682 serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM: Serine O-acetyltransferase; SPTR: A0LLQ8 Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase.
 
     0.645
Deba_1295
COGs: COG2378 transcriptional regulator protein; KEGG: sat:SYN_02988 transcriptional regulator; SPTR: Q2LX17 Transcriptional regulator.
  
     0.640
Deba_1855
COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like; SPTR: Q2IKV6 ATP-dependent nuclease subunit B-like.
  
     0.636
Deba_3246
KEGG: rca:Rcas_3345 hypothetical protein; SPTR: A7NP99 Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.632
Deba_3075
Hypothetical protein; InterPro IPR013830:IPR013831; KEGG: mgm:Mmc1_1079 GDSL family lipase; SPTR: A0L6K4 Lipolytic enzyme, G-D-S-L family.
  
     0.619
Deba_1174
Methyltransferase FkbM family; InterPro IPR006342; KEGG: cyt:cce_0521 hypothetical protein; SPTR: B5JGB3 Methyltransferase, FkbM family protein; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family.
 
     0.615
Deba_1548
Putative phytochrome sensor protein; InterPro IPR003018; KEGG: dol:Dole_1615 response regulator receiver protein; PFAM: GAF domain protein; SPTR: A9A019 Response regulator receiver protein; PFAM: Protein of unknown function, DUF484.
  
     0.594
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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