STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1179KEGG: hor:Hore_13900 hypothetical protein; SPTR: B8CXX1 Putative uncharacterized protein. (196 aa)    
Predicted Functional Partners:
Deba_1180
2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: ttu:TERTU_0169 putative 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; SPTR: C5BLF2 Putative 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase; Belongs to the ComB family.
       0.723
Deba_1178
COGs: COG0031 Cysteine synthase; InterPro IPR001926:IPR005856:IPR005859; KEGG: dal:Dalk_2651 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: B8FIV3 Cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases.
       0.642
Deba_1177
COGs: COG1045 Serine acetyltransferase; InterPro IPR011004:IPR001451; KEGG: sfu:Sfum_2682 serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM: Serine O-acetyltransferase; SPTR: A0LLQ8 Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase.
       0.548
Deba_1175
Alpha-2-macroglobulin domain protein; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR008930:IPR002890:IPR011625:IPR001599; KEGG: acp:A2cp1_1926 alpha-2-macroglobulin domain protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin; SPTR: B8J778 Alpha-2-macroglobulin domain protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain.
       0.428
Deba_1176
Penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterProIPR012338:IPR001264:IPR001460:IPR009647:IPR 011815; KEGG: ade:Adeh_2036 glycosyl transferase family penicillin-binding protein transpeptidase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Q2IJH6 Glycosyl transferase, family 51 / Penicillin-binding protein, transpeptidase; TIGRFAM: penicillin-binding protein 1C; PFAM: Penicillin-Binding Protein C-terminus Fami [...]
       0.428
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.