STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1203KEGG: dsa:Desal_1384 hypothetical protein; SPTR: C6BRK6 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043. (271 aa)    
Predicted Functional Partners:
Deba_3208
KEGG: dal:Dalk_2965 protein of unknown function DUF169; SPTR: B8FL20 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.
  
     0.645
Deba_2324
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.594
Deba_3096
Hypothetical protein; KEGG: phe:Phep_2408 heparinase II/III family protein; SPTR: B0NLH9 Putative uncharacterized protein.
  
     0.570
Deba_0684
COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043; KEGG: mem:Memar_0808 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: A3CTP1 Xanthine/uracil/vitamin C permease; PFAM: Permease family.
  
     0.567
Deba_1204
Small multidrug resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: bbr:BB3914 putative membrane transport protein; PFAM: small multidrug resistance protein; SPTR: C0N1Z3 Multidrug resistance protein, SMR family; manually curated; PFAM: Small Multidrug Resistance protein.
       0.548
Deba_3244
InterPro IPR008969; KEGG: hypothetical protein; SPTR: B7G5I9 Predicted protein.
  
     0.519
Deba_1253
InterPro IPR001647:IPR012287:IPR009057; KEGG: cmi:CMM_0286 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: A6FY19 Putative TetR-family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.512
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.496
Deba_1295
COGs: COG2378 transcriptional regulator protein; KEGG: sat:SYN_02988 transcriptional regulator; SPTR: Q2LX17 Transcriptional regulator.
  
     0.489
Deba_2369
InterPro IPR012480; KEGG: app:CAP2UW1_0857 heparinase II/III family protein; PFAM: Heparinase II/III family protein; SPTR: C7RNQ9 Heparinase II/III family protein; PFAM: Heparinase II/III-like protein.
  
     0.478
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.