STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1308GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: bth:BT_1258 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C0D719 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family. (146 aa)    
Predicted Functional Partners:
Deba_2558
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
   0.530
Deba_2560
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: neu:NE1104 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: Q82VI0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
   0.530
Deba_2595
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
   0.530
Deba_2598
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: pna:Pnap_1572 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: A1VMK8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
   0.530
Deba_0464
InterPro IPR004360; KEGG: mac:MA0108 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C0EBN9 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
   
 0.488
Deba_0748
Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dps:DP1162 glycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: Q6AP33 Related to glycoprotein endopeptidase; PFAM: Glycoprotease family.
  
 
 0.470
Deba_0191
GCN5-related N-acetyltransferase; COGs: COG3153 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: dhd:Dhaf_2458 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C6ISG3 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
  
 0.445
Deba_2530
KEGG: rfr:Rfer_2515 hypothetical protein; SPTR: Q21VH1 Putative uncharacterized protein.
  
   
 0.424
Deba_2837
InterPro IPR000835:IPR011991; KEGG: cac:CAC0559 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q97LK1 Transcriptional regulator, MarR/EmrR family; PFAM: MarR family.
  
   
 0.415
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.