Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_1463KEGG: dat:HRM2_08280 hypothetical protein; SPTR: C0QJT8 Putative uncharacterized protein. (291 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.805
Deba_3032
KEGG: ter:Tery_1189 hypothetical protein; SPTR: Q116M7 Putative uncharacterized protein.
  
 
 0.805
Deba_1462
Hypothetical protein; InterPro IPR004827; KEGG: fal:FRAAL5152 dihydrolipoamide succinyltransferase, component of 2-oxoglutarate dehydrogenase complex (E2); SPTR: C0GSJ8 Ankyrin.
      
0.773
Deba_1772
Cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR005286:IPR003593:IPR003439:IPR017871; KEGG: sth:STH139 cell-division ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q67T69 Cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE.
    
 
 0.764
Deba_1771
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
    
 
 0.763
Deba_1464
Serine/threonine protein kinase PpkA; InterPro IPR002035; KEGG: dat:HRM2_08320 predicted serine/threonine protein kinase PpkA; SPTR: C0QJU2 Predicted serine/threonine protein kinase PpkA.
 
     0.560
Deba_1466
KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; SPTR: C0QJU0 ABC-type transporter, permease protein.
 
    0.532
Deba_1461
PEGA domain protein; InterPro IPR013229:IPR011990; KEGG: dol:Dole_1853 TPR repeat-containing protein; PFAM: PEGA domain protein; SPTR: A8ZSC0 Tetratricopeptide TPR_2 repeat protein; PFAM: PEGA domain.
       0.513
Deba_1467
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: C0QJU0 ABC-type transporter, permease protein; PFAM: Predicted permease.
  
    0.471
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
 
    0.457
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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