STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_146917 kDa surface antigen; InterPro IPR008816; KEGG: dat:HRM2_08270 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: C0QJT7 Putative uncharacterized protein. (223 aa)    
Predicted Functional Partners:
Deba_1466
KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; SPTR: C0QJU0 ABC-type transporter, permease protein.
 
     0.887
Deba_1468
Protein of unknown function DUF323; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: dat:HRM2_08290 hypothetical protein; PFAM: protein of unknown function DUF323; SPTR: C0QJT9 Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme.
 
     0.881
Deba_1464
Serine/threonine protein kinase PpkA; InterPro IPR002035; KEGG: dat:HRM2_08320 predicted serine/threonine protein kinase PpkA; SPTR: C0QJU2 Predicted serine/threonine protein kinase PpkA.
 
     0.879
Deba_1467
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dat:HRM2_08300 ABC-type transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: C0QJU0 ABC-type transporter, permease protein; PFAM: Predicted permease.
 
     0.878
Deba_1470
KEGG: dat:HRM2_08260 serine/threonine-protein kinase MRCK alpha (CDC42-binding protein kinase alpha); SPTR: C0QJT6 Serine/threonine-protein kinase MRCK alpha (CDC42-binding protein kinase alpha).
       0.662
Deba_1465
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: dat:HRM2_08310 ABC-type transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QJU1 ABC-type transporter, ATP-binding protein; PFAM: ABC transporter.
 
     0.621
Deba_1471
Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151; KEGG: dat:HRM2_08250 CtpA1; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: C0QJT5 CtpA1; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc).
       0.530
Deba_1409
Protein of unknown function DUF34; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678:IPR017221:IPR011322; KEGG: sth:STH598 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Q67RW0 Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.422
Deba_1396
KEGG: dsa:Desal_0956 hypothetical protein; SPTR: C6BZW4 Putative uncharacterized protein.
  
     0.418
Deba_3124
KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR001347:IPR000644; KEGG: dol:Dole_2110 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SPTR: A8ZTY1 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.405
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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