Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_1517COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: dal:Dalk_3654 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: B8FGW2 Amidohydrolase 2; PFAM: Amidohydrolase. (277 aa)    
Predicted Functional Partners:
Deba_1483
KEGG: dal:Dalk_0095 hypothetical protein; SPTR: B8FKJ0 Putative uncharacterized protein.
  
     0.721
Deba_3151
KEGG: sfu:Sfum_1611 hypothetical protein; SPTR: A0LIP6 Conserved hypothetical membrane protein.
  
     0.705
Deba_1935
KEGG: gsu:GSU3079 hypothetical protein; SPTR: Q748C8 Putative uncharacterized protein.
  
     0.680
Deba_1764
KEGG: dol:Dole_2107 hypothetical protein; SPTR: A8ZTX8 Putative uncharacterized protein.
  
     0.604
Deba_2613
DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR012961:IPR 014021; KEGG: sfu:Sfum_3369 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DSH domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: A0LNP0 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase; DSHCT (NUC185) domain.
  
     0.558
Deba_1516
Peptidase S24/S26A/S26B, conserved region; Represses a number of genes involved in the response to DNA damage (SOS response).
       0.540
Deba_0987
KEGG: sfu:Sfum_1055 hypothetical protein; SPTR: A0LH47 Putative uncharacterized protein; PFAM: Ogr/Delta-like zinc finger.
 
     0.537
Deba_2725
ATP synthase I; InterPro IPR008413; KEGG: dal:Dalk_2857 ATP synthase I; PFAM: ATP synthase I; SPTR: B8FBA3 ATP synthase I; PFAM: ATP synthase I chain.
  
     0.491
Deba_1081
RNA-binding protein, predicted; InterPro IPR019300; KEGG: tye:THEYE_A0086 hypothetical protein; PFAM: RNA-binding protein, predicted; SPTR: B5YHB6 Putative uncharacterized protein; PFAM: Predicted RNA-binding protein.
  
     0.472
Deba_1359
COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR000634:IPR004450; KEGG: dal:Dalk_4397 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: B8FNA7 Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase.
  
    0.470
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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