STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1567Hypothetical protein; KEGG: ecw:EcE24377A_C0002 TraT complement resistance protein; SPTR: A7ZGS1 TraT complement resistance protein. (184 aa)    
Predicted Functional Partners:
Deba_1566
KEGG: rpb:RPB_3423 hypothetical protein; SPTR: C4GKM1 Putative uncharacterized protein.
       0.773
Deba_1569
Peptidoglycan binding domain protein; COGs: COG3926 Putative secretion activating protein; InterPro IPR008565:IPR018537; KEGG: pde:Pden_4087 hypothetical protein; PFAM: Peptidoglycan binding domain; protein of unknown function DUF847; SPTR: A1B9F9 Putative uncharacterized protein; PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847).
       0.494
Deba_1570
KEGG: dde:Dde_3394 hypothetical protein; SPTR: Q30VV8 Putative uncharacterized protein.
       0.494
Deba_1571
KEGG: mca:MCA2902 hypothetical protein; SPTR: Q603A5 Putative uncharacterized protein.
       0.490
Deba_1572
InterPro IPR018087; KEGG: mca:MCA2904 hypothetical protein; SPTR: Q603A3 Putative uncharacterized protein.
       0.490
Deba_1573
Hypothetical protein; KEGG: mca:MCA2905 prophage MuMc02 tail fiber domain-containing protein; SPTR: Q603A2 Prophage MuMc02, tail fiber domain protein; PFAM: Phage tail protein (Tail_P2_I).
       0.490
Deba_1574
Baseplate J family protein; COGs: COG3948 Phage-related baseplate assembly protein; InterPro IPR006949:IPR014507; KEGG: drm:Dred_1220 baseplate J family protein; PFAM: Baseplate J family protein; SPTR: B6WRR4 Putative uncharacterized protein; PFAM: Baseplate J-like protein.
       0.490
Deba_1575
GPW/gp25 family protein; InterPro IPR007048; KEGG: drm:Dred_1219 gpW/GP25 family protein; PFAM: GPW/gp25 family protein; SPTR: C2BG15 GPW/gp25 family protein; PFAM: Gene 25-like lysozyme.
       0.490
Deba_1576
KEGG: cvi:CV_0414 hypothetical protein; SPTR: Q7P101 Putative uncharacterized protein; PFAM: Phage P2 GpU.
       0.490
Deba_1577
COGs: COG4540 Phage P2 baseplate assembly protein gpV; InterPro IPR013046:IPR006531; KEGG: drm:Dred_1217 phage baseplate assembly protein V; PFAM: baseplate assembly protein V; SPTR: B6WRR1 Putative uncharacterized protein; TIGRFAM: phage baseplate assembly protein V; PFAM: Phage-related baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V.
       0.490
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.