STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1596Protein of unknown function DUF935; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: dde:Dde_3373 hypothetical protein; PFAM: protein of unknown function DUF935; SPTR: Q30VX9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF935). (505 aa)    
Predicted Functional Partners:
Deba_1597
Phage head morphogenesis protein, SPP1 gp7 family; COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30; InterPro IPR006528; KEGG: dde:Dde_3374 phage putative head morphogenesis protein, SPP1 gp7; PFAM: putative head morphogenesis protein SPP1 gp7; SPTR: Q30VX8 Phage putative head morphogenesis protein, SPP1 gp7; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.
    0.977
Deba_1595
Protein of unknown function DUF264; COGs: COG4373 Mu-like prophage FluMu protein gp28; InterPro IPR004921; KEGG: dra:DR_A0094 hypothetical protein; PFAM: protein of unknown function DUF264; SPTR: Q9RZ60 Putative uncharacterized protein; PFAM: Terminase-like family.
 
    0.946
Deba_1593
KEGG: dde:Dde_3370 hypothetical protein; SPTR: Q30VY2 Putative uncharacterized protein.
 
     0.932
Deba_1591
KEGG: dde:Dde_3375 hypothetical protein; SPTR: Q30VX7 Putative uncharacterized protein.
 
    0.910
Deba_1587
COGs: COG5005 Mu-like prophage protein gpG; InterPro IPR006522; KEGG: dvu:DVU1114 virion morphogenesis protein; PFAM: virion morphogenesis (putative tail completion) protein; SPTR: Q72D17 Virion morphogenesis protein; TIGRFAM: phage virion morphogenesis protein; PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein.
 
    0.858
Deba_1588
Protein of unknown function DUF1320; COGs: COG4387 Mu-like prophage protein gp36; InterPro IPR009752; KEGG: sfu:Sfum_1884 hypothetical protein; PFAM: protein of unknown function DUF1320; SPTR: A0LJG7 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1320).
 
   
 0.856
Deba_0105
Integrase catalytic region; InterProIPR001584:IPR012337:IPR009061:IPR009057:IPR 012287; KEGG: dvu:DVU1140 bacteriophage transposase A protein, putative; PFAM: Integrase catalytic region; SPTR: Q72CZ1 Bacteriophage transposase A protein, putative; PFAM: Mu DNA binding, I gamma subdomain; Mu DNA-binding domain; Integrase core domain.
 
  
 0.811
Deba_1609
Integrase catalytic region; InterProIPR012337:IPR009061:IPR009057:IPR001584:IPR 012287; KEGG: dvu:DVU1140 bacteriophage transposase A protein, putative; PFAM: Integrase catalytic region; SPTR: Q72CZ1 Bacteriophage transposase A protein, putative; PFAM: Mu transposase, C-terminal; Mu DNA binding, I gamma subdomain; Integrase core domain.
 
  
 0.811
Deba_1608
COGs: COG2842 Uncharacterized ATPase putative transposase; KEGG: dvu:DVU1139 bacteriophage DNA transposition B protein, putative; SPTR: Q72CZ2 Bacteriophage DNA transposition B protein, putative.
 
  
 0.807
Deba_1594
KEGG: dde:Dde_3371 hypothetical protein; SPTR: Q30VY1 Putative uncharacterized protein; PFAM: Transposase.
  
    0.799
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.