Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1628AMP-dependent synthetase and ligase; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: dol:Dole_3006 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8ZZ36 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme. (616 aa)    
Predicted Functional Partners:
Deba_0149
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: chy:CHY_0845 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q3ADT8 Long-chain-fatty-acid--CoA ligase; PFAM: AMP-binding enzyme.
 
 
 0.752
Deba_1780
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: ctt:CtCNB1_4404 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0IUZ3 Long-chain-fatty-acid--CoA ligase; PFAM: AMP-binding enzyme.
 
 
0.686
Deba_0581
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR018486:IPR020845; KEGG: dal:Dalk_0694 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FJX1 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 
 
0.682
Deba_0298
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_4880 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FDC5 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 
 
0.681
Deba_2748
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_2036 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FG52 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 
 
0.677
Deba_3255
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dal:Dalk_4148 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: B8FMW2 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 
 
0.676
Deba_0138
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: dol:Dole_0337 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: A8ZSY3 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 
 
0.675
Deba_0015
AMP-dependent synthetase and ligase; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: ade:Adeh_2886 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q2IDJ9 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
  
  
 
0.653
Deba_2969
KEGG: bcv:Bcav_3932 hypothetical protein; SPTR: C5C533 Putative uncharacterized protein.
   
 0.581
Deba_1011
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: rca:Rcas_0546 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A7NGS9 ABC transporter related; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
    0.562
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.