STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1634Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: dol:Dole_2648 flavodoxin/nitric oxide synthase; SPTR: A8ZX72 Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin. (144 aa)    
Predicted Functional Partners:
Deba_1633
NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: dal:Dalk_3455 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: B8FLJ7 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase.
 
    0.792
Deba_1631
KEGG: dal:Dalk_2368 hypothetical protein; SPTR: B8FAX5 Putative uncharacterized protein.
 
  
 0.764
Deba_0689
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.735
Deba_1632
KEGG: sat:SYN_00675 putative cytoplasmic protein; SPTR: Q2LV52 Hypothetical cytosolic protein; PFAM: DsrE/DsrF-like family.
 
     0.728
Deba_1764
KEGG: dol:Dole_2107 hypothetical protein; SPTR: A8ZTX8 Putative uncharacterized protein.
  
     0.645
dfx
Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity.
  
  
 0.642
Deba_0225
KEGG: dol:Dole_2869 hypothetical protein; SPTR: A8ZYE7 Putative uncharacterized protein.
 
     0.619
Deba_0070
Hypothetical protein; InterPro IPR017896:IPR017900; KEGG: sfu:Sfum_3217 hypothetical protein; SPTR: A0LN88 Putative uncharacterized protein.
 
   
 0.591
Deba_2892
Peptidase M48 Ste24p; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterProIPR001915:IPR001440:IPR019734:IPR011990:IPR 013026; KEGG: dps:DP0525 hypothetical protein; PFAM: peptidase M48 Ste24p; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: C8R0Y9 Peptidase M48 Ste24p; PFAM: Peptidase family M48.
  
     0.583
Deba_0987
KEGG: sfu:Sfum_1055 hypothetical protein; SPTR: A0LH47 Putative uncharacterized protein; PFAM: Ogr/Delta-like zinc finger.
 
     0.570
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.