STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1688Protein of unknown function DUF324; InterPro IPR005537; KEGG: rru:Rru_A1149 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: Q2RV95 Putative uncharacterized protein; PFAM: RAMP superfamily. (469 aa)    
Predicted Functional Partners:
Deba_1690
KEGG: rru:Rru_A1151 hypothetical protein; SPTR: Q2RV93 Putative uncharacterized protein.
  
 
 0.931
Deba_1687
KEGG: rru:Rru_A1148 hypothetical protein; SPTR: Q2RV96 Putative uncharacterized protein; PFAM: RAMP superfamily.
 
     0.930
Deba_1689
KEGG: rru:Rru_A1150 hypothetical protein; SPTR: Q2RV94 Putative uncharacterized protein; PFAM: RAMP superfamily.
       0.794
Deba_1351
KEGG: syn:sll7067 hypothetical protein; SPTR: Q6ZED1 Putative uncharacterized protein sll7067.
 
 
 0.751
Deba_1693
KEGG: dau:Daud_1295 hypothetical protein; SPTR: A4BL60 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2276).
 
   
 0.639
Deba_0550
KEGG: dde:Dde_0493 hypothetical protein; SPTR: C1SFS4 Putative uncharacterized protein.
  
     0.467
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.