STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1714Hypothetical protein. (45 aa)    
Predicted Functional Partners:
Deba_1715
Major capsid protein HK97; InterPro IPR006444; KEGG: pap:PSPA7_5150 putative phage-related protein; PFAM: major capsid protein HK97; SPTR: A6VBQ1 Putative phage-related protein; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
       0.532
Deba_1716
Phage prohead protease, HK97 family; COGs: COG3740 Phage head maturation protease; InterPro IPR006433; KEGG: pap:PSPA7_5151 HK97 family phage prohead protease; PFAM: peptidase U35 phage prohead HK97; SPTR: A9FSW2 Prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
       0.429
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.