STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1751GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: bja:blr2886 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: A0Y7P0 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family. (191 aa)    
Predicted Functional Partners:
Deba_2481
Protein of unknown function DUF169; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: dol:Dole_2553 hypothetical protein; PFAM: protein of unknown function DUF169; SPTR: A8ZWM6 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.
  
     0.656
Deba_1706
Protein of unknown function DUF362; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160; KEGG: dol:Dole_0364 hypothetical protein; PFAM: protein of unknown function DUF362; SPTR: A8ZT10 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362).
  
     0.647
Deba_1223
KEGG: dal:Dalk_0401 hypothetical protein; SPTR: B8FH22 Putative uncharacterized protein; PFAM: Rho termination factor, N-terminal domain.
  
     0.562
Deba_1058
KEGG: sfu:Sfum_0186 glycosyl transferase family protein; SPTR: A0LEN6 Glycosyl transferase, family 2.
  
     0.534
Deba_0864
KEGG: dal:Dalk_4108 hypothetical protein; SPTR: B8FM60 Putative uncharacterized protein.
  
     0.524
Deba_0647
KEGG: sfu:Sfum_2838 hypothetical protein; SPTR: A0LM64 Conserved hypothetical cytosolic protein.
  
     0.508
Deba_1749
Response regulator receiver sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR001789:IPR003661:IPR003594:IPR011006:IPR 009082:IPR004358:IPR005467; KEGG: ote:Oter_3856 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: B1ZZ58 Sensor protein; PFAM: Response regulator receiver d [...]
       0.499
Deba_1750
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: mpd:MCP_2581 putative response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FJ25 Response regulator receiver protein; PFAM: Response regulator receiver domain.
       0.498
Deba_0199
InterPro IPR001173; KEGG: dal:Dalk_2929 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: B8FBH5 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
     0.490
Deba_1735
KEGG: sfu:Sfum_2838 hypothetical protein; SPTR: A0LM64 Conserved hypothetical cytosolic protein.
  
     0.489
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.