STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1764KEGG: dol:Dole_2107 hypothetical protein; SPTR: A8ZTX8 Putative uncharacterized protein. (139 aa)    
Predicted Functional Partners:
Deba_0987
KEGG: sfu:Sfum_1055 hypothetical protein; SPTR: A0LH47 Putative uncharacterized protein; PFAM: Ogr/Delta-like zinc finger.
  
     0.773
Deba_1935
KEGG: gsu:GSU3079 hypothetical protein; SPTR: Q748C8 Putative uncharacterized protein.
  
     0.766
Deba_2892
Peptidase M48 Ste24p; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterProIPR001915:IPR001440:IPR019734:IPR011990:IPR 013026; KEGG: dps:DP0525 hypothetical protein; PFAM: peptidase M48 Ste24p; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: C8R0Y9 Peptidase M48 Ste24p; PFAM: Peptidase family M48.
  
     0.766
Deba_1483
KEGG: dal:Dalk_0095 hypothetical protein; SPTR: B8FKJ0 Putative uncharacterized protein.
 
     0.762
Deba_1530
KEGG: sfu:Sfum_1763 hypothetical protein; SPTR: A0LJ48 Putative uncharacterized protein.
  
     0.756
Deba_3113
KEGG: sat:SYN_00080 putative cytoplasmic protein; SPTR: Q2LWI3 Hypothetical cytosolic protein.
  
     0.751
Deba_3065
InterPro IPR011004; KEGG: dal:Dalk_5167 hexapaptide repeat-containing transferase; SPTR: B8FE56 Hexapaptide repeat-containing transferase.
  
     0.744
Deba_3151
KEGG: sfu:Sfum_1611 hypothetical protein; SPTR: A0LIP6 Conserved hypothetical membrane protein.
  
     0.740
Deba_2725
ATP synthase I; InterPro IPR008413; KEGG: dal:Dalk_2857 ATP synthase I; PFAM: ATP synthase I; SPTR: B8FBA3 ATP synthase I; PFAM: ATP synthase I chain.
  
     0.739
Deba_0055
UspA domain protein; InterPro IPR006016:IPR006015:IPR014729; KEGG: dol:Dole_1330 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A8ZYM9 UspA domain protein; PFAM: Universal stress protein family.
  
     0.724
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.