STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
Deba_1774Glycosyl transferase family 2; InterPro IPR001173; KEGG: mex:Mext_0845 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A9W0Z4 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2. (322 aa)    
Predicted Functional Partners:
Deba_1290
COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR013767:IPR003018:IPR013656:IPR 003661:IPR003594:IPR008207:IPR005467:IPR000014:IPR000700:I PR004358:IPR001610:IPR011006:IPR009082; KEGG: dvm:DvMF_1096 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain con [...]
  
  
 0.817
Deba_3097
Tetratricopeptide TPR_2 repeat protein; InterProIPR001440:IPR013105:IPR019734:IPR013026:IPR 011990; KEGG: dat:HRM2_20780 tetratricopeptide (TPR) domain protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: C0QDB3 Tetratricopeptide (TPR) domain protein; PFAM: ChAPs (Chs5p-Arf1p-binding proteins); TIGRFAM: putative PEP-CTERM system TPR-repeat lipoprotein.
  
 
 0.788
Deba_3176
Creatininase; COGs: COG1402 Uncharacterized protein putative amidase; InterPro IPR003785; KEGG: sfu:Sfum_0661 creatininase; PFAM: Creatininase; SPTR: A0LG08 Creatininase; PFAM: Creatinine amidohydrolase.
  
  
 0.689
Deba_1075
Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: gsu:GSU0106 soj protein; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: Q74GY7 Soj protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.637
Deba_1494
Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: xau:Xaut_0582 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: A7ICU5 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.637
Deba_0507
Diguanylate cyclase and serine/threonine protein kinase with TPR repeats; InterProIPR000160:IPR001440:IPR013105:IPR006597:IPR 011717:IPR019734:IPR011990:IPR013026; KEGG: drt:Dret_2188 diguanylate cyclase and serine/threonine protein kinase with TPR repeats; PFAM: Tetratricopeptide TPR_2 repeat protein; GGDEF domain containing protein; TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_4; SMART: GGDEF domain containing protein; Tetratricopeptide repeat; SPTR: C8X4X5 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats; [...]
  
 
 0.627
Deba_1775
Hypothetical protein; InterPro IPR011990:IPR013026; KEGG: rca:Rcas_3987 TPR repeat-containing protein; SPTR: B6BDR6 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit, putative.
       0.620
Deba_0503
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000644:IPR000160; KEGG: drt:Dret_0176 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C8WZK3 Diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
  
 0.603
Deba_1773
Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
     
 0.597
Deba_1392
Response regulator receiver protein; InterProIPR001789:IPR001440:IPR013105:IPR019734:IPR 013026:IPR011990:IPR006597:IPR011006; KEGG: dat:HRM2_46700 TPR-repeat-containing protein with CheY-like receiver; PFAM: response regulator receiver; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: response regulator receiver; Tetratricopeptide repeat; Sel1 domain protein repeat-containing protein; SPTR: C0QGE7 TPR-repeat-containing protein with CheY-like receiver; PFAM: Response regulator receiver domain; Tetratricopeptide repeat.
  
 
 0.577
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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