STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1776COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tro:trd_1606 dolichyl-phosphate mannose synthase related protein; PFAM: glycosyl transferase family 2; SPTR: B9L0B3 Dolichyl-phosphate mannose synthase related protein; PFAM: Glycosyl transferase family 2. (242 aa)    
Predicted Functional Partners:
Deba_1777
InterPro IPR005242; KEGG: gme:Gmet_1389 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q39VV1 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
  
 0.804
Deba_1028
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sye:Syncc9902_0083 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Q2BI18 Glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
     0.736
Deba_0355
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ppf:Pput_3929 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: C5T0P4 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
     0.671
Deba_0455
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR016040:IPR017473:IPR017475; KEGG: mxa:MXAN_2922 sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1PWC3 Similar to capsular polysaccharide synthesis protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; e [...]
 
  
 0.560
Deba_1775
Hypothetical protein; InterPro IPR011990:IPR013026; KEGG: rca:Rcas_3987 TPR repeat-containing protein; SPTR: B6BDR6 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit, putative.
       0.538
Deba_1774
Glycosyl transferase family 2; InterPro IPR001173; KEGG: mex:Mext_0845 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: A9W0Z4 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
 
 0.506
Deba_1778
Hypothetical protein; KEGG: mch:Mchl_4214 sulfoacetaldehyde acetyltransferase; SPTR: B7L185 Sulfoacetaldehyde acetyltransferase.
       0.494
Deba_2099
Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: tgr:Tgr7_3093 glycosyl transferase family 39; PFAM: glycosyl transferase family 39; SPTR: B8GQ15 Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
  
 0.465
Deba_1779
Conserved hypothetical protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: dol:Dole_1483 hypothetical protein; SPTR: A8ZZD4 Putative uncharacterized protein; PFAM: Putative lysophospholipase.
       0.456
Deba_2098
Glycosyl transferase family 39; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: gme:Gmet_0887 glycosyl transferase family protein; PFAM: glycosyl transferase family 39; SPTR: Q39X95 Glycosyl transferase, family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
  
 0.453
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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