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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1777InterPro IPR005242; KEGG: gme:Gmet_1389 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q39VV1 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein. (326 aa)    
Predicted Functional Partners:
Deba_1776
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tro:trd_1606 dolichyl-phosphate mannose synthase related protein; PFAM: glycosyl transferase family 2; SPTR: B9L0B3 Dolichyl-phosphate mannose synthase related protein; PFAM: Glycosyl transferase family 2.
 
  
 0.804
Deba_2870
YYY membrane protein; COGs: COG5427 Uncharacterized membrane protein; InterPro IPR018746; KEGG: cag:Cagg_2106 hypothetical protein; PFAM: YYY membrane protein; SPTR: B8GCE8 Putative uncharacterized protein; PFAM: Uncharacterized membrane protein (DUF2298); TIGRFAM: Chlor_Arch_YYY domain.
 
  
 0.692
Deba_2871
Conserved hypothetical protein; COGs: COG4745 membrane-bound mannosyltransferase; InterPro IPR019962; KEGG: tro:trd_1271 hypothetical protein; SPTR: B9L1L1 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR03663.
  
     0.614
Deba_0927
KEGG: hoh:Hoch_4871 hypothetical protein; SPTR: A6G4G1 Putative uncharacterized protein.
  
     0.554
Deba_3246
KEGG: rca:Rcas_3345 hypothetical protein; SPTR: A7NP99 Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
  
 0.531
Deba_1778
Hypothetical protein; KEGG: mch:Mchl_4214 sulfoacetaldehyde acetyltransferase; SPTR: B7L185 Sulfoacetaldehyde acetyltransferase.
       0.516
Deba_1775
Hypothetical protein; InterPro IPR011990:IPR013026; KEGG: rca:Rcas_3987 TPR repeat-containing protein; SPTR: B6BDR6 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit, putative.
       0.515
Deba_1779
Conserved hypothetical protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: dol:Dole_1483 hypothetical protein; SPTR: A8ZZD4 Putative uncharacterized protein; PFAM: Putative lysophospholipase.
     
 0.496
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.484
Deba_1120
PBS lyase HEAT domain protein repeat-containing protein; InterProIPR016024:IPR004155:IPR000357:IPR011989:IPR 000225; KEGG: mba:Mbar_A1826 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SPTR: A0ZHQ4 Putative uncharacterized protein; PFAM: PBS lyase HEAT-like repeat.
  
     0.483
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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