STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1796KEGG: sfu:Sfum_3820 hypothetical protein; SPTR: Q310G5 Putative uncharacterized protein. (156 aa)    
Predicted Functional Partners:
Deba_1795
KEGG: dde:Dde_0937 hypothetical protein; SPTR: C6MK62 Putative uncharacterized protein.
       0.795
Deba_1797
KEGG: sfu:Sfum_3819 hypothetical protein; SPTR: A0LPY6 Putative uncharacterized protein.
       0.795
Deba_1798
InterPro IPR010090; KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; PFAM: tail tape measure protein TP901 core region; SPTR: A0LPY5 Phage tail tape measure protein, TP901 family; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.795
Deba_1792
Protein of unknown function DUF1353; InterPro IPR010767; KEGG: dde:Dde_0940 hypothetical protein; PFAM: protein of unknown function DUF1353; SPTR: C6MK65 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1353).
       0.622
Deba_1794
COGs: COG3500 Phage protein D; KEGG: dde:Dde_0938 phage protein D-like; SPTR: Q314A7 Phage protein D-like; PFAM: Phage late control gene D protein (GPD).
       0.622
Deba_1791
KEGG: sfu:Sfum_3825 hypothetical protein; SPTR: A0LPZ2 Putative uncharacterized protein; PFAM: Phage-related baseplate assembly protein.
       0.620
Deba_1793
Peptidase M15A; InterPro IPR009045:IPR013230; KEGG: dde:Dde_1882 hypothetical protein; PFAM: Peptidase M15A; SPTR: Q310G7 Putative uncharacterized protein; PFAM: Peptidase M15.
       0.620
Deba_1790
KEGG: sfu:Sfum_3826 hypothetical protein; SPTR: A0LPZ3 Putative uncharacterized protein.
       0.612
Deba_1789
PaaR repeat-containing protein; InterPro IPR008727; KEGG: sfu:Sfum_3827 PaaR repeat-containing protein; SPTR: Q310H1 Putative uncharacterized protein; PFAM: PAAR motif.
       0.611
Deba_1788
KEGG: sfu:Sfum_3828 hypothetical protein; SPTR: A0LPZ5 Putative uncharacterized protein.
       0.608
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.