Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Deba_1802KEGG: sfu:Sfum_3814 hypothetical protein; SPTR: C6MK55 Putative uncharacterized protein. (85 aa)    
Predicted Functional Partners:
Deba_1801
COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: sfu:Sfum_3815 phage tail sheath protein; PFAM: tail sheath protein; SPTR: C6MK56 Tail sheath protein; PFAM: Phage tail sheath protein.
       0.818
Deba_1803
KEGG: sfu:Sfum_3813 hypothetical protein; SPTR: C6MK54 Putative uncharacterized protein.
       0.805
Deba_1800
InterPro IPR011747; KEGG: sfu:Sfum_3816 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: C6MK57 Putative uncharacterized protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
       0.792
Deba_1799
KEGG: sfu:Sfum_3817 hypothetical protein; SPTR: A0LPY4 Putative uncharacterized protein.
       0.768
Deba_1795
KEGG: dde:Dde_0937 hypothetical protein; SPTR: C6MK62 Putative uncharacterized protein.
       0.495
Deba_1796
KEGG: sfu:Sfum_3820 hypothetical protein; SPTR: Q310G5 Putative uncharacterized protein.
       0.495
Deba_1797
KEGG: sfu:Sfum_3819 hypothetical protein; SPTR: A0LPY6 Putative uncharacterized protein.
       0.495
Deba_1798
InterPro IPR010090; KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; PFAM: tail tape measure protein TP901 core region; SPTR: A0LPY5 Phage tail tape measure protein, TP901 family; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.494
Deba_1804
Transcriptional regulator, TetR family; InterPro IPR011075:IPR009057:IPR001647:IPR015893; KEGG: dat:HRM2_00670 HTH-type transcriptional regulator (TetR-family protein); PFAM: regulatory protein TetR; SPTR: Q2N4Y3 Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region.
       0.494
Deba_1805
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dat:HRM2_00680 HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q1JW26 Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.494
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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