node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Deba_1830 | Deba_1831 | Deba_1830 | Deba_1831 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | 0.904 |
Deba_1830 | Deba_1832 | Deba_1830 | Deba_1832 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | 0.950 |
Deba_1830 | Deba_1834 | Deba_1830 | Deba_1834 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | KEGG: sfu:Sfum_3786 hypothetical protein; SPTR: A0LPV3 Putative uncharacterized protein. | 0.952 |
Deba_1830 | Deba_1835 | Deba_1830 | Deba_1835 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | KEGG: sfu:Sfum_3785 hypothetical protein; SPTR: A0LPV2 Putative uncharacterized protein. | 0.936 |
Deba_1830 | Deba_1837 | Deba_1830 | Deba_1837 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | RNA polymerase, sigma-24 subunit, ECF subfamily; InterPro IPR018170:IPR014284; KEGG: dde:Dde_1928 sigma-24 (FecI-like); SPTR: C6MK24 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. | 0.896 |
Deba_1830 | polA | Deba_1830 | Deba_2722 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.474 |
Deba_1830 | topA | Deba_1830 | Deba_1132 | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.506 |
Deba_1831 | Deba_1830 | Deba_1831 | Deba_1830 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | 0.904 |
Deba_1831 | Deba_1832 | Deba_1831 | Deba_1832 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | 0.901 |
Deba_1831 | Deba_1834 | Deba_1831 | Deba_1834 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | KEGG: sfu:Sfum_3786 hypothetical protein; SPTR: A0LPV3 Putative uncharacterized protein. | 0.874 |
Deba_1831 | Deba_1835 | Deba_1831 | Deba_1835 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | KEGG: sfu:Sfum_3785 hypothetical protein; SPTR: A0LPV2 Putative uncharacterized protein. | 0.858 |
Deba_1831 | Deba_1837 | Deba_1831 | Deba_1837 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | RNA polymerase, sigma-24 subunit, ECF subfamily; InterPro IPR018170:IPR014284; KEGG: dde:Dde_1928 sigma-24 (FecI-like); SPTR: C6MK24 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. | 0.758 |
Deba_1831 | Deba_2577 | Deba_1831 | Deba_2577 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001:IPR001650:IPR000330:IPR014021; KEGG: sfu:Sfum_3846 helicase domain-containing protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: A0LQ13 Helicase domain protein; manually curated; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain. | 0.592 |
Deba_1831 | polA | Deba_1831 | Deba_2722 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.548 |
Deba_1831 | topA | Deba_1831 | Deba_1132 | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.654 |
Deba_1832 | Deba_1830 | Deba_1832 | Deba_1830 | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | DNA primase catalytic core domain protein; COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264; KEGG: sfu:Sfum_3790 DNA primase catalytic core; PFAM: DNA primase catalytic core domain; SMART: zinc finger CHC2-family protein; SPTR: A0LPV7 DNA primase catalytic core, N-terminal domain; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core. | 0.950 |
Deba_1832 | Deba_1831 | Deba_1832 | Deba_1831 | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase; SPTR: C6MK30 ATP-dependent RecD/TraA family DNA helicase; TIGRFAM: helicase, putative, RecD/TraA family. | 0.901 |
Deba_1832 | Deba_1834 | Deba_1832 | Deba_1834 | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | KEGG: sfu:Sfum_3786 hypothetical protein; SPTR: A0LPV3 Putative uncharacterized protein. | 0.948 |
Deba_1832 | Deba_1835 | Deba_1832 | Deba_1835 | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | KEGG: sfu:Sfum_3785 hypothetical protein; SPTR: A0LPV2 Putative uncharacterized protein. | 0.931 |
Deba_1832 | Deba_1837 | Deba_1832 | Deba_1837 | ERCC4 domain protein; COGs: COG1948 ERCC4-type nuclease; InterPro IPR006166:IPR011335:IPR020819; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein; PFAM: ERCC4 domain protein; SMART: ERCC4 domain protein; SPTR: C6MK29 ERCC4 domain protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; InterPro IPR018170:IPR014284; KEGG: dde:Dde_1928 sigma-24 (FecI-like); SPTR: C6MK24 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. | 0.884 |