Deba_1964 protein (Desulfarculus baarsii) - STRING interaction network

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Deba_1964

Conserved hypothetical protein; Displays ATPase and GTPase activities. (298 aa)

Predicted Functional Partners:

Deba_1963

0.932

Deba_0380

0.865

Deba_1965

0.857

hpf

0.856

Deba_1966

0.799

Deba_0980

0.765

Deba_1946

0.765

Deba_1961

0.618

Deba_1959

0.582

rsmI

0.570

Your Current Organism:

Desulfarculus baarsii

NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Deba_0380	Deba_1964	Deba_0380	Deba_1964	Protein of unknown function UPF0052 and CofD; COGs: COG0391 conserved hypothetical protein; InterPro IPR002882; KEGG: dma:DMR_20270 hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; SPTR: C4XRH3 Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related.	Conserved hypothetical protein; Displays ATPase and GTPase activities.	0.865
Deba_0980	Deba_1961	Deba_0980	Deba_1961	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterProIPR016027:IPR003029:IPR019307:IPR012340:IPR 004659; KEGG: gme:Gmet_2546 ribonuclease E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Q39SK9 Ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.402
Deba_0980	Deba_1964	Deba_0980	Deba_1964	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterProIPR016027:IPR003029:IPR019307:IPR012340:IPR 004659; KEGG: gme:Gmet_2546 ribonuclease E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Q39SK9 Ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	Conserved hypothetical protein; Displays ATPase and GTPase activities.	0.765
Deba_0980	rsmI	Deba_0980	Deba_3161	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterProIPR016027:IPR003029:IPR019307:IPR012340:IPR 004659; KEGG: gme:Gmet_2546 ribonuclease E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Q39SK9 Ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	Phosphocarrier, HPr family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.424
Deba_1946	Deba_1961	Deba_1946	Deba_1961	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR016027:IPR012340:IPR004659; KEGG: sfu:Sfum_1609 ribonuclease; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: A0LIP4 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.402
Deba_1946	Deba_1964	Deba_1946	Deba_1964	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR016027:IPR012340:IPR004659; KEGG: sfu:Sfum_1609 ribonuclease; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: A0LIP4 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	Conserved hypothetical protein; Displays ATPase and GTPase activities.	0.765
Deba_1946	rsmI	Deba_1946	Deba_3161	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR016027:IPR012340:IPR004659; KEGG: sfu:Sfum_1609 ribonuclease; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: A0LIP4 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	Phosphocarrier, HPr family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.424
Deba_1959	Deba_1961	Deba_1959	Deba_1961	Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.804
Deba_1959	Deba_1963	Deba_1959	Deba_1963	Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.	Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178:IPR016152; KEGG: sfu:Sfum_2067 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: A0LJZ8 Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	0.627
Deba_1959	Deba_1964	Deba_1959	Deba_1964	Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.	Conserved hypothetical protein; Displays ATPase and GTPase activities.	0.582
Deba_1959	Deba_1965	Deba_1959	Deba_1965	Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.	COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: gur:Gura_2967 PTS system fructose subfamily IIA component; PFAM: PTS system fructose subfamily IIA component; SPTR: A5G5S1 PTS system fructose subfamily IIA component; PFAM: PTS system fructose IIA component.	0.530
Deba_1959	hpf	Deba_1959	Deba_1962	Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	0.599
Deba_1961	Deba_0980	Deba_1961	Deba_0980	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterProIPR016027:IPR003029:IPR019307:IPR012340:IPR 004659; KEGG: gme:Gmet_2546 ribonuclease E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Q39SK9 Ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	0.402
Deba_1961	Deba_1946	Deba_1961	Deba_1946	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR016027:IPR012340:IPR004659; KEGG: sfu:Sfum_1609 ribonuclease; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: A0LIP4 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.	0.402
Deba_1961	Deba_1959	Deba_1961	Deba_1959	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653:IPR014340; KEGG: gme:Gmet_1281 OstA-like protein; PFAM: OstA family protein; SPTR: Q39W57 OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA.	0.804
Deba_1961	Deba_1963	Deba_1961	Deba_1963	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178:IPR016152; KEGG: sfu:Sfum_2067 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: A0LJZ8 Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	0.842
Deba_1961	Deba_1964	Deba_1961	Deba_1964	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Conserved hypothetical protein; Displays ATPase and GTPase activities.	0.618
Deba_1961	Deba_1965	Deba_1961	Deba_1965	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: gur:Gura_2967 PTS system fructose subfamily IIA component; PFAM: PTS system fructose subfamily IIA component; SPTR: A5G5S1 PTS system fructose subfamily IIA component; PFAM: PTS system fructose IIA component.	0.636
Deba_1961	Deba_1966	Deba_1961	Deba_1966	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.	0.436
Deba_1961	hpf	Deba_1961	Deba_1962	RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	0.786

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