STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Deba_1966Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (155 aa)    
Predicted Functional Partners:
Deba_1964
Conserved hypothetical protein; Displays ATPase and GTPase activities.
 
    0.799
Deba_1965
COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: gur:Gura_2967 PTS system fructose subfamily IIA component; PFAM: PTS system fructose subfamily IIA component; SPTR: A5G5S1 PTS system fructose subfamily IIA component; PFAM: PTS system fructose IIA component.
 
     0.782
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.592
Deba_0748
Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dps:DP1162 glycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: Q6AP33 Related to glycoprotein endopeptidase; PFAM: Glycoprotease family.
 
 
 0.589
Deba_1963
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178:IPR016152; KEGG: sfu:Sfum_2067 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: A0LJZ8 Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
     
 0.582
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
    0.557
Deba_1969
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.516
Deba_2558
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
 
 0.496
Deba_2560
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: neu:NE1104 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: Q82VI0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
 
 0.496
Deba_2595
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
   
 
 0.496
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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