Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Deba_2007Protein of unknown function DUF124; COGs: COG2013 conserved hypothetical protein; InterPro IPR002838:IPR016031; KEGG: amr:AM1_1071 hypothetical protein; PFAM: protein of unknown function DUF124; SPTR: B0C1U4 Putative uncharacterized protein; PFAM: Protein of unknown function DUF124; TIGRFAM: conserved hypothetical protein TIGR00266. (338 aa)    
Predicted Functional Partners:
Deba_0674
Putative enzyme (3.4.-); COGs: COG1073 Hydrolase of the alpha/beta superfamily; KEGG: pca:Pcar_2424 putative enzyme (3.4.-); SPTR: Q3A1U4 Putative enzyme (3.4.-); PFAM: Prolyl oligopeptidase family; Putative lysophospholipase.
  
    0.522
Deba_2008
KEGG: geo:Geob_1673 protein of unknown function DUF559; SPTR: B9M650 Putative uncharacterized protein.
       0.459
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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