STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2010KEGG: sus:Acid_5380 hypothetical protein; SPTR: Q01VI6 Putative uncharacterized protein; PFAM: Disulphide bond corrector protein DsbC. (167 aa)    
Predicted Functional Partners:
Deba_0067
Redoxin domain protein; InterPro IPR013740:IPR017936:IPR012336:IPR012335; KEGG: afe:Lferr_0206 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: C6MAN3 Thioredoxin family protein; PFAM: Redoxin.
 
 
 0.849
Deba_1369
Thioredoxin domain-containing protein; InterPro IPR012335:IPR012336; KEGG: sfu:Sfum_3604 thioredoxin domain-containing protein; SPTR: A0LPC2 Thioredoxin domain; PFAM: Thioredoxin.
  
 
 0.798
Deba_2997
DSBA oxidoreductase; COGs: COG1651 Protein-disulfide isomerase; InterPro IPR001853:IPR012335:IPR012336; KEGG: dma:DMR_06250 DsbA oxidoreductase family protein; PFAM: DSBA oxidoreductase; SPTR: C4XIV2 DSBA oxidoreductase family protein.
  
 
 0.718
Deba_2011
Hypothetical protein; InterPro IPR015424; KEGG: ttj:TTHA0934 glutamate-1-semialdehyde 2,1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase) (GSA-AT); SPTR: Q5SJS4 Glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III.
       0.676
Deba_2266
Redox-active disulfide protein 2; InterPro IPR012336:IPR012335:IPR005243; KEGG: dol:Dole_2878 redox-active disulfide protein 2; SPTR: A8ZYF6 Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2.
  
 
 0.676
Deba_2267
Conserved hypothetical protein; InterPro IPR012336:IPR012335; KEGG: sfu:Sfum_3389 hypothetical protein; SPTR: A0LNR0 Putative uncharacterized protein.
  
 
 0.676
Deba_0069
InterPro IPR011990; KEGG: sfu:Sfum_0584 hypothetical protein; SPTR: A0LFT1 Putative uncharacterized protein.
  
     0.554
Deba_1508
Hypothetical protein; InterPro IPR011990; KEGG: sfu:Sfum_2878 hypothetical protein; SPTR: A0LMA3 Putative uncharacterized protein.
  
     0.541
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
 
 0.477
Deba_1855
COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: ade:Adeh_2513 ATP-dependent nuclease subunit B-like; SPTR: Q2IKV6 ATP-dependent nuclease subunit B-like.
  
     0.468
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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