Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Deba_2035NLP/P60 protein; InterPro IPR000064; KEGG: sfu:Sfum_0991 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: A0LGY4 NLP/P60 protein; PFAM: NlpC/P60 family. (461 aa)    
Predicted Functional Partners:
Deba_1771
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.820
Deba_0471
Hypothetical protein; KEGG: ote:Oter_1689 cell wall surface anchor family protein; SPTR: B1ZUT9 Cell wall surface anchor family protein.
  
 
 0.691
Deba_1772
Cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR005286:IPR003593:IPR003439:IPR017871; KEGG: sth:STH139 cell-division ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q67T69 Cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE.
  
 
 0.685
Deba_2034
COGs: COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; InterPro IPR005546:IPR006315; KEGG: dol:Dole_2458 outer membrane autotransporter; PFAM: Autotransporter beta- domain protein; SPTR: A8ZW28 Outer membrane autotransporter barrel domain; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta-domain; TIGRFAM: outer membrane autotransporter barrel domain.
 
  
 0.657
Deba_0879
Peptidoglycan-binding lysin domain protein; InterPro IPR018392; KEGG: tgr:Tgr7_2244 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: C0GS09 Putative uncharacterized protein; PFAM: LysM domain.
 
 
 0.630
Deba_2324
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.612
Deba_1085
MJ0042 family finger-like protein; InterPro IPR011723; KEGG: dma:DMR_21170 hypothetical protein; SPTR: C4XS86 Putative uncharacterized protein; TIGRFAM: MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like domain.
  
   
 0.567
Deba_1575
GPW/gp25 family protein; InterPro IPR007048; KEGG: drm:Dred_1219 gpW/GP25 family protein; PFAM: GPW/gp25 family protein; SPTR: C2BG15 GPW/gp25 family protein; PFAM: Gene 25-like lysozyme.
 
   0.559
Deba_1302
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: drt:Dret_0142 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: C8WZG9 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes.
 
  
 0.551
Deba_1471
Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151; KEGG: dat:HRM2_08250 CtpA1; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: C0QJT5 CtpA1; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc).
    
 
 0.538
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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