STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Deba_2119Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR009010:IPR006656:IPR006657; KEGG: sfu:Sfum_0031 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: A0LE82 Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (529 aa)    
Predicted Functional Partners:
Deba_2120
NADH dehydrogenase (quinone); COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR017896:IPR017900:IPR006655:IPR 000283:IPR019574:IPR001450:IPR006963:IPR006656; KEGG: dat:HRM2_16870 FdhA5; PFAM: molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: C0QAZ5 FdhA5; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G [...]
     0.990
Deba_0481
Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR001450:IPR006963:IPR006656:IPR 009051:IPR017896:IPR017900:IPR006655; KEGG: dds:Ddes_1544 molybdopterin oxidoreductase Fe4s4 region; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8J119 Molybdopterin oxidoreductase Fe4S4 region; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain.
 
     0.976
Deba_0785
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017896:IPR012335:IPR012336:IPR011538:IPR 019554:IPR019575:IPR001450:IPR017900:IPR019825:IPR001949; KEGG: dal:Dalk_2271 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: B8FIH4 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoredu [...]
  
 
 0.975
Deba_2839
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR011538:IPR019554:IPR019575:IPR001450:IPR 012335:IPR017896:IPR012336:IPR017900:IPR001949; KEGG: dal:Dalk_5089 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: B8FDX9 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F ir [...]
  
 
 0.975
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.974
Deba_0487
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR019575:IPR013027:IPR009051:IPR012285:IPR 016040:IPR000759:IPR001949; KEGG: dds:Ddes_1543 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: B8J118 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; manually curated; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH-u [...]
 
 0.973
Deba_1519
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR012336:IPR011538:IPR019554:IPR019575:IPR 001450:IPR012335:IPR017896:IPR017900:IPR001949; KEGG: dat:HRM2_16600 NuoF; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C0QAI3 NuoF; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain [...]
  
 
 0.969
Deba_0467
COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027:IPR000103; KEGG: dal:Dalk_2354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B8FAW1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
 0.933
Deba_0786
Ferredoxin; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR001041:IPR017896:IPR001450:IPR017900:IPR 000283; KEGG: dal:Dalk_2270 ferredoxin; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FIH3 Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
   
 0.922
Deba_0241
Carbon-monoxide dehydrogenase, catalytic subunit; COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterProIPR004137:IPR011254:IPR010047:IPR016101:IPR 016099; KEGG: dat:HRM2_16670 CdhA; PFAM: Prismane; PRIAM: Carbon-monoxide dehydrogenase (acceptor); SPTR: C0QAX6 CdhA; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
    
 0.915
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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