STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2138COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: dau:Daud_1208 magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: B1I3V1 Magnesium chelatase. (142 aa)    
Predicted Functional Partners:
Deba_2516
Magnesium chelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: cts:Ctha_2441 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: B3QX80 Cobaltochelatase; PFAM: CobN/Magnesium Chelatase.
 
  
 0.871
Deba_2469
Cobaltochelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: dal:Dalk_4060 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: B8FM12 Cobaltochelatase; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
 
  
 0.870
Deba_2517
Cobaltochelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003006:IPR003672; KEGG: ppd:Ppro_1259 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: A1ANG0 Hydrogenobyrinic acid a,c-diamide cobaltochelatase; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
 
  
 0.870
Deba_1399
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR000523:IPR002035:IPR003593; KEGG: dau:Daud_1209 magnesium chelatase; PFAM: von Willebrand factor type A; magnesium chelatase ChlI subunit; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; SPTR: B1I3V2 Magnesium chelatase; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.
 
 
0.614
Deba_2520
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR002035:IPR000523; KEGG: ppd:Ppro_1261 magnesium chelatase; PFAM: von Willebrand factor type A; magnesium chelatase ChlI subunit; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; SPTR: A1ANG2 Protoporphyrin IX magnesium-chelatase; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain; TIGRFAM: cobaltochelatase subunit.
 
 
0.609
Deba_1464
Serine/threonine protein kinase PpkA; InterPro IPR002035; KEGG: dat:HRM2_08320 predicted serine/threonine protein kinase PpkA; SPTR: C0QJU2 Predicted serine/threonine protein kinase PpkA.
  
 
 0.582
Deba_1988
KEGG: dps:DP1532 hypothetical protein; SPTR: Q6AN13 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2134).
  
 
 0.582
Deba_2209
Geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR006076:IPR011777; KEGG: mta:Moth_0808 geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; SPTR: Q2RKB3 Geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; TIGRFAM: geranylgeranyl reductase family.
 
  
 0.578
Deba_3038
Lycopene beta and epsilon cyclase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR008671:IPR003042; KEGG: afr:AFE_2544 geranylgeranyl reductase family protein; PFAM: Lycopene beta and epsilon cyclase; SPTR: B7J778 Geranylgeranyl reductase family protein; PFAM: HI0933-like protein.
 
  
 0.561
Deba_2137
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR009051:IPR012285:IPR017896:IPR017900:IPR 017969:IPR004017; KEGG: sfu:Sfum_2146 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A0LK76 Putative uncharacterized protein; PFAM: Cysteine-rich domain.
       0.468
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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