STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2167Hypothetical protein; KEGG: rru:Rru_B0007 glycosyl transferase, group 1; SPTR: Q2RMP2 Glycosyl transferase, group 1. (447 aa)    
Predicted Functional Partners:
Deba_2168
KEGG: sse:Ssed_3004 hypothetical protein; SPTR: B7S3F5 Putative uncharacterized protein.
      0.616
Deba_2169
Methyltransferase type 12; InterPro IPR013217; KEGG: cts:Ctha_1954 RNA methyltransferase, TrmA family; PFAM: Methyltransferase type 12; SPTR: A0Y156 Membrane-associated protein.
       0.465
Deba_2170
Hypothetical protein; KEGG: nar:Saro_0601 sulfotransferase; SPTR: Q2GAS5 Sulfotransferase; PFAM: Sulfotransferase domain.
       0.456
Deba_2171
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015421:IPR015422:IPR000653; KEGG: gme:Gmet_2332 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q39T67 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
       0.456
Deba_2172
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015421:IPR015422:IPR000653; KEGG: gme:Gmet_2332 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q39T67 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
       0.456
Deba_2173
WbqC-like family protein; InterPro IPR014985; KEGG: psb:Psyr_1578 hypothetical protein; PFAM: WbqC-like family protein; SPTR: Q4ZW46 Putative uncharacterized protein; PFAM: WbqC-like protein family.
       0.456
Deba_2165
Methyltransferase type 12; InterPro IPR013217; KEGG: dma:DMR_45250 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: C4XRV0 Putative uncharacterized protein; PFAM: Methyltransferase domain.
       0.449
Deba_2166
KEGG: nmu:Nmul_A0293 hypothetical protein; SPTR: Q2YCC0 Putative uncharacterized protein.
       0.449
Deba_2164
Methyltransferase type 11; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: ppd:Ppro_0039 ArsR family transcriptional regulator; PFAM: Methyltransferase type 11; SPTR: B0VEV0 Putative 3-demethylubiquinone-9 3-O-methyltransferase; PFAM: Methyltransferase domain.
       0.443
Deba_2162
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sus:Acid_0658 NAD-dependent epimerase/dehydratase; PFAM: glycosyl transferase family 2; SPTR: Q02BA7 NAD-dependent epimerase/dehydratase; manually curated; PFAM: Glycosyl transferase family 2.
       0.425
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.