Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_2168KEGG: sse:Ssed_3004 hypothetical protein; SPTR: B7S3F5 Putative uncharacterized protein. (333 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.708
Deba_2169
Methyltransferase type 12; InterPro IPR013217; KEGG: cts:Ctha_1954 RNA methyltransferase, TrmA family; PFAM: Methyltransferase type 12; SPTR: A0Y156 Membrane-associated protein.
       0.693
Deba_2171
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015421:IPR015422:IPR000653; KEGG: gme:Gmet_2332 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q39T67 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
       0.688
Deba_2172
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR015424:IPR015421:IPR015422:IPR000653; KEGG: gme:Gmet_2332 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Q39T67 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
       0.688
Deba_2170
Hypothetical protein; KEGG: nar:Saro_0601 sulfotransferase; SPTR: Q2GAS5 Sulfotransferase; PFAM: Sulfotransferase domain.
       0.679
Deba_2173
WbqC-like family protein; InterPro IPR014985; KEGG: psb:Psyr_1578 hypothetical protein; PFAM: WbqC-like family protein; SPTR: Q4ZW46 Putative uncharacterized protein; PFAM: WbqC-like protein family.
       0.679
Deba_2167
Hypothetical protein; KEGG: rru:Rru_B0007 glycosyl transferase, group 1; SPTR: Q2RMP2 Glycosyl transferase, group 1.
      0.615
Deba_0214
KEGG: ter:Tery_1486 hypothetical protein; SPTR: Q115Q0 Putative uncharacterized protein; PFAM: Sulfotransferase family.
  
 
 
 0.401
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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