STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2269Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011991; KEGG: ank:AnaeK_4017 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q1K378 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (114 aa)    
Predicted Functional Partners:
Deba_2268
Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: dat:HRM2_48210 putative permease; PFAM: permease; SPTR: C0QIC5 Putative permease; PFAM: Predicted permease.
 
  
 0.848
Deba_2266
Redox-active disulfide protein 2; InterPro IPR012336:IPR012335:IPR005243; KEGG: dol:Dole_2878 redox-active disulfide protein 2; SPTR: A8ZYF6 Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2.
 
   
 0.835
Deba_2267
Conserved hypothetical protein; InterPro IPR012336:IPR012335; KEGG: sfu:Sfum_3389 hypothetical protein; SPTR: A0LNR0 Putative uncharacterized protein.
 
   
 0.835
Deba_2271
Permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: dal:Dalk_3678 permease; PFAM: permease; SPTR: B8FLL2 Permease; PFAM: Predicted permease.
 
  
 0.683
Deba_2270
Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845:IPR011991; KEGG: dal:Dalk_3679 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: B8FLL3 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
 
    
0.582
Deba_1290
COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR013767:IPR003018:IPR013656:IPR 003661:IPR003594:IPR008207:IPR005467:IPR000014:IPR000700:I PR004358:IPR001610:IPR011006:IPR009082; KEGG: dvm:DvMF_1096 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain con [...]
  
  
 0.424
Deba_2646
Transcriptional regulator, ArsR family; InterPro IPR001845:IPR011991; KEGG: cpb:Cphamn1_0567 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q1JWZ4 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
 
     0.408
Deba_2200
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR016156:IPR001763:IPR013027:IPR004099; KEGG: dps:DP0550 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; SPTR: Q6AQU4 Related to NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain.
 
  
 0.406
Deba_0139
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR001763:IPR016156; KEGG: hor:Hore_02400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; SPTR: B8D132 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisatio [...]
 
  
 0.403
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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