STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2302KEGG: ank:AnaeK_3685 hypothetical protein; SPTR: B4UD99 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1285). (160 aa)    
Predicted Functional Partners:
Deba_2862
Sporulation domain protein; InterPro IPR007730; KEGG: dol:Dole_3214 sporulation domain-containing protein; PFAM: Sporulation domain protein; SPTR: A9A098 Sporulation domain protein; PFAM: Sporulation related domain.
  
     0.698
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.667
Deba_2300
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: gem:GM21_3730 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: C6E6X1 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: AIR carboxylase.
       0.631
Deba_2796
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
     0.595
Deba_1058
KEGG: sfu:Sfum_0186 glycosyl transferase family protein; SPTR: A0LEN6 Glycosyl transferase, family 2.
  
    0.577
Deba_1175
Alpha-2-macroglobulin domain protein; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR008930:IPR002890:IPR011625:IPR001599; KEGG: acp:A2cp1_1926 alpha-2-macroglobulin domain protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin; SPTR: B8J778 Alpha-2-macroglobulin domain protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain.
  
     0.565
Deba_2613
DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR012961:IPR 014021; KEGG: sfu:Sfum_3369 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DSH domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: A0LNP0 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase; DSHCT (NUC185) domain.
  
     0.556
Deba_2807
KEGG: ade:Adeh_1251 hypothetical protein; SPTR: Q2IQE6 Putative uncharacterized protein.
  
     0.553
Deba_2689
Hypothetical protein; InterPro IPR002345:IPR011990; KEGG: sti:Sthe_1174 tetratricopeptide TPR_4; SPTR: D1C2Z3 Tetratricopeptide TPR_4; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.551
Deba_0421
KEGG: dal:Dalk_4656 integrin-like repeat-containing protein; SPTR: B8FNQ3 Integrin-like repeat-containing protein.
  
     0.547
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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