STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2331COGs: COG1261 Flagellar basal body P-ring biosynthesis protein; InterPro IPR013974:IPR017585; KEGG: dal:Dalk_0992 flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; SPTR: B8FK20 Flagella basal body P-ring formation protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA. (321 aa)    
Predicted Functional Partners:
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.993
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.990
Deba_2334
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR011055:IPR019301:IPR016047; KEGG: tte:TTE1975 membrane proteins related to metalloendopeptidase; PFAM: Peptidase M23; Flagellar protein FlgJ-like; SPTR: Q8R8M0 Membrane proteins related to metalloendopeptidases; PFAM: Rod binding protein; Peptidase family M23.
  
  
 0.985
flgK
COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371:IPR001444:IPR010810:IPR010930; KEGG: dal:Dalk_0987 flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellin hook IN repeat protein; flagellar basal body rod protein; SPTR: B8FK15 Flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: Flagellin hook IN motif; Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK.
 
  
 0.979
Deba_2306
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.972
Deba_2330
COGs: COG4786 Flagellar basal body rod protein; InterProIPR019776:IPR001444:IPR010930:IPR020013:IPR 012834; KEGG: dvm:DvMF_2518 flagellar basal body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: B8DN17 Flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria.
 
  
 0.971
Deba_2329
COGs: COG4786 Flagellar basal body rod protein; InterProIPR019776:IPR001444:IPR010930:IPR020013:IPR 012836; KEGG: geo:Geob_0627 flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: B9M0F5 Flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins.
 
  
 0.958
Deba_2311
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.957
Deba_2312
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001543:IPR001689; KEGG: dma:DMR_22580 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: C4XSQ7 Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
 
  
 0.955
Deba_2335
FlgN family protein; InterPro IPR007809; KEGG: tte:TTE0493 hypothetical protein; PFAM: FlgN family protein; SPTR: C6PBB0 FlgN family protein; PFAM: FlgN protein.
  
  
 0.951
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.