STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2344Protein of unknown function DUF115; COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: mta:Moth_0762 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: Q2RKF9 Putative uncharacterized protein; PFAM: Protein of unknown function DUF115. (504 aa)    
Predicted Functional Partners:
Deba_2343
KEGG: dma:DMR_23530 hypothetical protein; SPTR: C4XT02 Putative uncharacterized protein.
 
  
 0.946
Deba_2346
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mag:amb0148 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: B4D5P9 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
 
    0.867
Deba_2347
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: gsu:GSU3025 heptosyltransferase family protein; PFAM: glycosyl transferase family 9; SPTR: Q748H7 Heptosyltransferase family protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase).
  
  
 0.822
Deba_2349
COGs: COG4641 conserved hypothetical protein; KEGG: gsu:GSU3024 hypothetical protein; SPTR: Q748H8 Putative uncharacterized protein.
  
  
 0.814
Deba_2345
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR011990:IPR019734:IPR013026:IPR001173; KEGG: amr:AM1_0991 TPR repeat-containing glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Q1Q7L5 Similar to glycosyltransferase fused to TPR-repeat domain; PFAM: Glycosyl transferase family 2.
       0.778
Deba_2341
KEGG: dal:Dalk_0625 hypothetical protein; SPTR: B8FJQ2 Putative uncharacterized protein.
 
     0.721
Deba_2672
COGs: COG1344 Flagellin and related hook-associated protein; KEGG: gme:Gmet_0439 flagellin-like; SPTR: Q1NR20 Flagellin-like:Flagellin hook IN; PFAM: Bacterial flagellin N-terminal helical region.
 
 
 0.710
Deba_2348
KEGG: dde:Dde_0564 hypothetical protein; SPTR: Q315N1 Putative uncharacterized protein.
 
    0.699
Deba_1027
COGs: COG2089 Sialic acid synthase; InterPro IPR006190:IPR013132:IPR013974:IPR013785; KEGG: fnu:FN1684 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: A3Z4G4 N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family.
 
  
 0.645
Deba_1617
Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: dal:Dalk_4149 protein of unknown function DUF342; PFAM: protein of unknown function DUF342; SPTR: B8FMW3 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF342).
  
    0.645
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.