STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2345COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR011990:IPR019734:IPR013026:IPR001173; KEGG: amr:AM1_0991 TPR repeat-containing glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Q1Q7L5 Similar to glycosyltransferase fused to TPR-repeat domain; PFAM: Glycosyl transferase family 2. (393 aa)    
Predicted Functional Partners:
Deba_2343
KEGG: dma:DMR_23530 hypothetical protein; SPTR: C4XT02 Putative uncharacterized protein.
 
  
 0.813
Deba_2346
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mag:amb0148 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: B4D5P9 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
    0.801
Deba_2347
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: gsu:GSU3025 heptosyltransferase family protein; PFAM: glycosyl transferase family 9; SPTR: Q748H7 Heptosyltransferase family protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase).
  
  
 0.786
Deba_2344
Protein of unknown function DUF115; COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: mta:Moth_0762 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: Q2RKF9 Putative uncharacterized protein; PFAM: Protein of unknown function DUF115.
       0.778
Deba_1033
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: tro:trd_1593 dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Q2BI24 Teichoic acid biosynthesis protein; PFAM: Glycosyl transferase family 2.
 
 
 0.574
Deba_0455
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR016040:IPR017473:IPR017475; KEGG: mxa:MXAN_2922 sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1PWC3 Similar to capsular polysaccharide synthesis protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; e [...]
 
  
 0.567
Deba_2349
COGs: COG4641 conserved hypothetical protein; KEGG: gsu:GSU3024 hypothetical protein; SPTR: Q748H8 Putative uncharacterized protein.
  
  
 0.494
Deba_2348
KEGG: dde:Dde_0564 hypothetical protein; SPTR: Q315N1 Putative uncharacterized protein.
       0.481
Deba_2342
KEGG: hypothetical protein; SPTR: Q8GFF2 Putative uncharacterized protein.
       0.461
Deba_2350
KEGG: aoe:Clos_2488 FlgN family protein; SPTR: A8MJN8 FlgN family protein.
       0.449
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.