STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2367Hypothetical protein; KEGG: pto:PTO0496 isopentenyl pyrophosphate isomerase; SPTR: Q1NYE9 Putative uncharacterized protein. (102 aa)    
Predicted Functional Partners:
Deba_2366
Hypothetical protein; SPTR: Q1NYE8 Putative uncharacterized protein.
       0.785
Deba_2368
KEGG: tgr:Tgr7_0065 hypothetical protein; SPTR: C0GRH8 Putative uncharacterized protein.
       0.781
Deba_2369
InterPro IPR012480; KEGG: app:CAP2UW1_0857 heparinase II/III family protein; PFAM: Heparinase II/III family protein; SPTR: C7RNQ9 Heparinase II/III family protein; PFAM: Heparinase II/III-like protein.
       0.535
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.